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Updates the requirements on pandas, numpy, pyarrow, matplotlib, hypothesis, ruff, pre-commit, commitizen, import-linter, types-requests, pymarkdownlnt, codespell and hatchling to permit the latest version.
Updates pandas from 3.0.3 to 3.0.5

Release notes

Sourced from pandas's releases.

pandas 3.0.5

We are pleased to announce the release of pandas 3.0.5. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

pandas 3.0.4

We are pleased to announce the release of pandas 3.0.4. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

Commits
  • e68db09 RLS: 3.0.5
  • 0697623 Backport PR #66428: DOC: update whatsnew for 3.0.5 (#66430)
  • 5d846d0 Backport PR #66090 on branch 3.0.x (BLD: exclude numpy 2.5.0 when building wh...
  • bef7a2b Backport PR #66169 on branch 3.0.x (CI: Fix pyarrow-nightly job (stale nightl...
  • 8188eb1 RLS: 3.0.4 (#66079)
  • bd35f15 [3.0.x] BUG: fix CoW issue in eval() (#66072)
  • 6195872 [backport 3.0.x] BUG: anchor whole alternation in Series.str.match for PyArro...
  • 70313be Backport PR #66051 on branch 3.0.x (BUG: fix regression in DataFrame setitem ...
  • 57ed3e2 [backport 3.0.x] Bump pypa/cibuildwheel from 3.4.1 to 4.1.0 (#65934) (#66026)
  • f9693fc [backport 3.0.x] BUG(pandas 3.0 regression): drop(index=...) doesn't accept N...
  • Additional commits viewable in compare view

Updates numpy from 2.5.0 to 2.5.1

Release notes

Sourced from numpy's releases.

v2.5.1 (July 4, 2026)

NumPy 2.5.1 Release Notes

The NumPy 2.5.1 is a patch release that fixes bugs discovered after the 2.5.0 release. The most noticeable is the fix is to the numpy datetime cython API which should allow downstream to support NumPy versions older than 2.5. Preparation for Python 3.15 continues along with typing improvements.

This release supports Python versions 3.12-3.14

Changes

  • The minimum supported GCC version has been updated from 9.3.0 to 10.3.0

    (gh-31843)

Contributors

A total of 10 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • Adhyan Gupta +
  • Ankit Ahlawat
  • Charles Harris
  • Iason Krommydas
  • Joren Hammudoglu
  • Kumar Aditya
  • Nathan Goldbaum
  • Sebastian Berg
  • Ties Jan Hefting +
  • Vineet Kumar

Pull requests merged

A total of 20 pull requests were merged for this release.

  • #31707: MAINT: Prepare 2.5.x for further development
  • #31721: CI: fix new cython-lint errors (#31711)
  • #31723: MAINT: Update meson to match main
  • #31729: TST: use setup-sde instead of curl to get SDE binaries (#31727)
  • #31829: BUG: Relax finfo to be easier accessible for all user dtypes...
  • #31831: TYP: Fix flatiter.__next__ return type for object_ and...
  • #31832: BUG: avoid deadlocks using NpyString API (#31682)
  • #31833: BUG: fix out array leak in reduceat and accumulate when dtype...
  • #31835: BUG: fix numpy datetime cython APIs to be compatible with older...
  • #31836: TYP: Fix incorrect dtype inference of asarray([]) (#31732)
  • #31837: TYP: Fix np.ma.masked_array 2.5.0 regression
  • #31838: FIX: Refactor error handling in array_setstate to prevent typecode...
  • #31839: TST: xfail multithreaded BLAS test more generously
  • #31840: MAINT: Rename subroutine for crackfortran tests

... (truncated)

Commits
  • 5e1d03f Merge pull request #31863 from charris/prepare-2.5.1
  • ad0b66b REL: Prepare for the NumPy 2.5.1 release.
  • 9df8516 Merge pull request #31858 from charris/backport-31688
  • 4dee265 Merge pull request #31857 from charris/backport-31775
  • dc8d553 Merge pull request #31856 from charris/backport-31846
  • 67cb4a8 fix:Signed integer overflow in datetime.c (#31688)
  • baa2589 TST: Clean up imports, formatting, and assertions
  • 2fe5ba4 TEST: Refactor tests to use np.testing.assert_raises_regex per review
  • bb46581 MAINT: Remove deprecated Python recursion fix
  • 8f34214 MAINT: Move SeedSequence recursion guard to C-layer and add tests
  • Additional commits viewable in compare view

Updates pyarrow from 24.0.0 to 25.0.0

Release notes

Sourced from pyarrow's releases.

Apache Arrow 25.0.0

Release Notes URL: https://arrow.apache.org/release/25.0.0.html

Apache Arrow 25.0.0 RC1

Release Notes: Release Candidate: 25.0.0 RC1

Commits
  • 59bea6e MINOR: [Release] Update versions for 25.0.0
  • 381fab6 MINOR: [Release] Update .deb/.rpm changelogs for 25.0.0
  • 7f72d5b MINOR: [Release] Update CHANGELOG.md for 25.0.0
  • fe2f85c GH-50336: [Release][Archery] Fix archery GitHub integration for release scrip...
  • c658548 GH-50293: [CI] Run check-labels for all triggers to avoid cancelling further ...
  • f83c8ca GH-50330: [C++][R][Parquet] Add missing typename in RleBitPackedDecoderGetRun...
  • 35e0f63 GH-50318: [R][CI] Install missing libpng-dev for test-r-linux-as-cran (#50328)
  • 61ca7a9 GH-50295: [C++][R] #include <ranges> in vector_select_k.cc breaks macOS CRAN ...
  • 1b6edb8 GH-50291: [Python][Packaging] Stop using nightly build dependencies for build...
  • e183ea9 MINOR: [Docs] Add Timestamp With Offset to canonical extension types status (...
  • Additional commits viewable in compare view

Updates matplotlib from 3.11.0 to 3.11.1

Release notes

Sourced from matplotlib's releases.

REL: v3.11.1

This is the first bugfix release of the 3.11.x series.

This release contains several bug-fixes and adjustments:

  • Fix tight layout of multiple subplots with sharey=True
  • Fix NoNorm cursor formatting for uint8 images
  • Fix occasional misalignment in reported mouse position (also fix a bug with canvas height)
  • Fix clipped Axis labels on 3D plots with tight layout
  • Fix inverted Axis on 3D plots
  • Fix restoring 'auto' aspect in 3D axes after switching from 'equal'
  • Fix missing glyphs when subsetting Type 1 fonts in PDF
  • Fix oversized embedding of Type 42 fonts in PDF/PostScript files

As well as several documentation and typing improvements and corrections.

Commits
  • 3c1757a REL: v3.11.1
  • 792c6b5 DOC: Prepare for 3.11.1
  • aaff9f6 Merge branch 'v3.11.0-doc' into v3.11.x
  • d4f4527 Merge pull request #32052 from meeseeksmachine/auto-backport-of-pr-32038-on-v...
  • 6ad4bcf Merge pull request #32050 from meeseeksmachine/auto-backport-of-pr-31304-on-v...
  • 7fb74d3 Merge pull request #32051 from meeseeksmachine/auto-backport-of-pr-32037-on-v...
  • c624aec Backport PR #32038: Fix occasional misalignment in reported mouse position (a...
  • 8eda2b7 Backport PR #32037: Bump the actions group with 3 updates
  • a0e7ae5 Backport PR #31304: Fix restoring 'auto' aspect in 3D axes after switching fr...
  • 9001323 Merge pull request #32047 from meeseeksmachine/auto-backport-of-pr-32025-on-v...
  • Additional commits viewable in compare view

Updates hypothesis from 6.155.7 to 6.163.0

Commits
  • 793e92d Bump hypothesis version to 6.163.0 and update changelog
  • ba2899b Merge pull request #4830 from Liam-DeVoe/from-regex-alphabet-collections
  • 5e3cae2 Bump hypothesis version to 6.162.0 and update changelog
  • d92a798 Merge pull request #4811 from Zac-HD/claude/sleepy-keller-o5cUK
  • f5e473a claude: support Collection[str] alphabet in from_regex, unify alphabet valida...
  • cbf124b Skip non-ns dtype construction at import on pandas < 2
  • 8d0a004 Address review: constrain constant-offset range, simplify tz classification
  • 8852abe add new test
  • 72d88bd simplify tests
  • 0addb38 Support timezone-aware datetime dtypes in hypothesis.extra.pandas
  • Additional commits viewable in compare view

Updates ruff from 0.15.20 to 0.16.0

Release notes

Sourced from ruff's releases.

0.16.0

Release Notes

Released on 2026-07-23.

Check out the blog post for a migration guide and overview of the changes!

Breaking changes

  • Ruff now enables a much larger set of rules by default (413, up from 59). See the blog post for more details and the new Default Rules page for a full listing of the enabled rules. Note that this is primarily an expansion, but 18 of the more opinionated pycodestyle (E) and pyflakes (F) rules have been removed from the default set: E401, E402, E701, E702, E703, E711, E712, E713, E714, E721, E731, E741, E742, E743, F403, F405, F406, and F722.

  • Ruff can now format Python code blocks in Markdown files and will do this by default. See the documentation for more details.

  • Ruff now supports ruff: ignore comments at the ends of lines, like noqa comments, or on the line preceding a diagnostic. For example, these both suppress an unused-import (F401) diagnostic:

    import math  # ruff: ignore[F401]
    ruff: ignore[F401]
    import os

  • Fixes are now shown in check and format --check output:

    ruff format --check .
    unformatted: File would be reformatted
     --> try.md:1:1
      |
    1 | ```python
      - import   math
    2 + import math
    3 | ```
      |
    1 file would be reformatted

    This example also shows off the Markdown formatting.

  • format --check now supports the same output formats as the linter, including the github and gitlab outputs for rendering annotations in CI:

    ruff format --check --output-format github .
    ::error title=ruff (unformatted),file=try.md,line=2,col=8,endLine=2,endColumn=10::try.md:2:8: unformatted: File would be reformatted

    See the CLI help or documentation for the full list of supported formats.

  • The filename, location, end_location, fix.edits[].location, and fix.edits[].end_location fields in the JSON output format may now be null rather than defaulting to the empty string and row 1, column 1, respectively.

... (truncated)

Changelog

Sourced from ruff's changelog.

0.16.0

Released on 2026-07-23.

Check out the blog post for a migration guide and overview of the changes!

Breaking changes

  • Ruff now enables a much larger set of rules by default (413, up from 59). See the blog post for more details and the new Default Rules page for a full listing of the enabled rules. Note that this is primarily an expansion, but 18 of the more opinionated pycodestyle (E) and pyflakes (F) rules have been removed from the default set: E401, E402, E701, E702, E703, E711, E712, E713, E714, E721, E731, E741, E742, E743, F403, F405, F406, and F722.

  • Ruff can now format Python code blocks in Markdown files and will do this by default. See the documentation for more details.

  • Ruff now supports ruff: ignore comments at the ends of lines, like noqa comments, or on the line preceding a diagnostic. For example, these both suppress an unused-import (F401) diagnostic:

    import math  # ruff: ignore[F401]
    ruff: ignore[F401]
    import os

  • Fixes are now shown in check and format --check output:

    ruff format --check .
    unformatted: File would be reformatted
     --> try.md:1:1
      |
    1 | ```python
      - import   math
    2 + import math
    3 | ```
      |
    1 file would be reformatted

    This example also shows off the Markdown formatting.

  • format --check now supports the same output formats as the linter, including the github and gitlab outputs for rendering annotations in CI:

... (truncated)

Commits
  • a2635fd Bump 0.16.0 (#27136)
  • 3433449 [ty] Reuse full call diagnostics for implicit setter calls (#27115)
  • 2240070 Reflect ruff: ignore and --add-ignore stabilization in documentation (#27...
  • 17ef711 Stabilize --add-ignore (#27125)
  • ef912bb Add newly stabilized rules to defaults (#27055)
  • b30f040 Stabilize new default rules (#27035)
  • bcd70c5 Exclude Markdown files from format-dev runs (#27052)
  • 87e51e2 Fix format --check spans for syntax errors (#27045)
  • afe2723 [flake8-gettext] Stabilize qualified-name and built-in binding resolution (...
  • a9702d8 [flake8-bandit] Stabilize string literal binding resolution (S310) (#26944)
  • Additional commits viewable in compare view

Updates pre-commit from 4.6.0 to 4.6.1

Release notes

Sourced from pre-commit's releases.

pre-commit v4.6.1

Fixes

Changelog

Sourced from pre-commit's changelog.

4.6.1 - 2026-07-21

Fixes

Commits
  • 242ce8a v4.6.1
  • 766e550 Merge pull request #3727 from pre-commit/dedupe
  • 1558d06 Merge pull request #3726 from pre-commit/exists-faster
  • 8a1c47a avoid duplicate files in --all-files during conflict
  • 2e01c99 faster check of rev existing locally as a commit
  • 3613bf2 Merge pull request #3701 from pre-commit/autoupdate-repos
  • 1d811d9 Return an error for invalid --repo
  • 374d354 Merge pull request #3711 from damonbayer/dmb_JULIA_DEPOT_PATH
  • 1e7994f set JULIA_DEPOT_PATH
  • b2b9119 Merge pull request #3719 from pre-commit/npm-unknown-options
  • Additional commits viewable in compare view

Updates commitizen from 4.16.4 to 4.16.5

Release notes

Sourced from commitizen's releases.

v4.16.5 (2026-07-16)

Fix

  • exclude star-history API from lychee link checker (#2029)
Commits
  • 6afcd8e bump: version 4.16.4 → 4.16.5
  • ff23c26 fix: exclude star-history API from lychee link checker (#2029)
  • 40b409b ci(deps): bump soupsieve from 2.8.3 to 2.8.4 (#2024)
  • 7812abe ci(deps): bump dawidd6/action-homebrew-bump-formula from 7 to 8 (#2022)
  • 3885e8b build(deps): update argcomplete requirement from <3.7,>=1.12.1 to >=1.12.1,<3...
  • 62fb12d docs(cli/screenshots): update CLI screenshots
  • See full diff in compare view

Updates import-linter from 2.12 to 2.13

Changelog

Sourced from import-linter's changelog.

2.13 (2026-07-03)

  • Add module counts option to the explore UI and drawgraph command.
Commits

Updates types-requests from 2.33.0.20260518 to 2.33.0.20260712

Commits

Updates pymarkdownlnt from 0.9.38 to 0.9.39

Release notes

Sourced from pymarkdownlnt's releases.

Version 0.9.39 - 2026-07-11

This release focused on some internal cleanup work and a major change! Please check out our improved API documentation along with a new support document giving what we believe is a solid walk-through of the existing Python PyMarkdownApi.

Added

  • Issue 1553
    • Added new documentation around how APIs are listed in the documentation.
    • Added a completely redone document showing how to the PyMarkdownApi.

Changed

  • Issue 1625
    • Changed how HTML tokens are generated for testing, to make more streamlined
Commits

Updates codespell from 2.4.2 to 2.4.3

Release notes

Sourced from codespell's releases.

v2.4.3

What's Changed

... (truncated)

Commits
  • 57b2140 Read only [tool.codespell] from TOML config (#3975)
  • 23b8d94 [pre-commit.ci] pre-commit autoupdate
  • 926c4d6 [pre-commit.ci] pre-commit autoupdate
  • 820a301 Merge pull request #3967 from codespell-project/peternewman-patch-1
  • 9fe42c9 Add common misspellings for reseeve->reserve to dictionary
  • 725173c [pre-commit.ci] pre-commit autoupdate
  • 86c13ee [pre-commit.ci] pre-commit autoupdate
  • 7b9f36c Bump actions/checkout from 6 to 7
  • bcc1b80 Add spelling corrections for simpe and variants.
  • 89584cc [pre-commit.ci] pre-commit autoupdate
  • Additional commits viewable in compare view

Updates hatchling to 1.31.0

Release notes

Sourced from hatchling's releases.

Hatchling v1.31.0

Fixed

  • Only rewrite the shebang of a shared script when a Python shebang is present on the first line, preserving binary files and other content verbatim instead of dropping leading bytes.
Commits
  • 4b3fd7d release Hatchling v1.31.0
  • 19ced89 Fix env-dependency extras being dropped when a metadata hook is configured (#...
  • 3b45c75 Prepare hatchling for release 1.31.0 (#2330)
  • e3d9b95 Addresses bug where blank lines are dropped when there is no shebang (#2328)
  • 9bc573c Prepare for 1.17.1 hatch release (#2329)
  • bbb12bb Pass --no-header to uv pip compile for deterministic lockfiles (#2327)
  • 8c06373 Fix uv lock check header comparison (#2317)
  • 5cfbb54 fix: skip extend injection if already present in ruff config (#2305)
  • cf85971 fix: use TemporaryDirectory + pylock*.toml for temp lock files (#2303)
  • 40c471c Docs: Add hatch-calver to version scheme plugins (#1725)
  • Additional commits viewable in compare view

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…th 13 updates

Updates the requirements on [pandas](https://github.com/pandas-dev/pandas), [numpy](https://github.com/numpy/numpy), [pyarrow](https://github.com/apache/arrow), [matplotlib](https://github.com/matplotlib/matplotlib), [hypothesis](https://github.com/HypothesisWorks/hypothesis), [ruff](https://github.com/astral-sh/ruff), [pre-commit](https://github.com/pre-commit/pre-commit), [commitizen](https://github.com/commitizen-tools/commitizen), [import-linter](https://github.com/seddonym/import-linter), [types-requests](https://github.com/python/typeshed), [pymarkdownlnt](https://github.com/jackdewinter/pymarkdown), [codespell](https://github.com/codespell-project/codespell) and [hatchling](https://github.com/pypa/hatch) to permit the latest version.

Updates `pandas` from 3.0.3 to 3.0.5
- [Release notes](https://github.com/pandas-dev/pandas/releases)
- [Commits](pandas-dev/pandas@v3.0.3...v3.0.5)

Updates `numpy` from 2.5.0 to 2.5.1
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.5.0...v2.5.1)

Updates `pyarrow` from 24.0.0 to 25.0.0
- [Release notes](https://github.com/apache/arrow/releases)
- [Commits](apache/arrow@apache-arrow-24.0.0...apache-arrow-25.0.0)

Updates `matplotlib` from 3.11.0 to 3.11.1
- [Release notes](https://github.com/matplotlib/matplotlib/releases)
- [Commits](matplotlib/matplotlib@v3.11.0...v3.11.1)

Updates `hypothesis` from 6.155.7 to 6.163.0
- [Release notes](https://github.com/HypothesisWorks/hypothesis/releases)
- [Commits](HypothesisWorks/hypothesis@v6.155.7...v6.163.0)

Updates `ruff` from 0.15.20 to 0.16.0
- [Release notes](https://github.com/astral-sh/ruff/releases)
- [Changelog](https://github.com/astral-sh/ruff/blob/main/CHANGELOG.md)
- [Commits](astral-sh/ruff@0.15.20...0.16.0)

Updates `pre-commit` from 4.6.0 to 4.6.1
- [Release notes](https://github.com/pre-commit/pre-commit/releases)
- [Changelog](https://github.com/pre-commit/pre-commit/blob/main/CHANGELOG.md)
- [Commits](pre-commit/pre-commit@v4.6.0...v4.6.1)

Updates `commitizen` from 4.16.4 to 4.16.5
- [Release notes](https://github.com/commitizen-tools/commitizen/releases)
- [Changelog](https://github.com/commitizen-tools/commitizen/blob/master/CHANGELOG.md)
- [Commits](commitizen-tools/commitizen@v4.16.4...v4.16.5)

Updates `import-linter` from 2.12 to 2.13
- [Changelog](https://github.com/seddonym/import-linter/blob/main/docs/release_notes.md)
- [Commits](seddonym/import-linter@v2.12...v2.13)

Updates `types-requests` from 2.33.0.20260518 to 2.33.0.20260712
- [Commits](https://github.com/python/typeshed/commits)

Updates `pymarkdownlnt` from 0.9.38 to 0.9.39
- [Release notes](https://github.com/jackdewinter/pymarkdown/releases)
- [Changelog](https://github.com/jackdewinter/pymarkdown/blob/main/changelog.md)
- [Commits](jackdewinter/pymarkdown@v0.9.38...v0.9.39)

Updates `codespell` from 2.4.2 to 2.4.3
- [Release notes](https://github.com/codespell-project/codespell/releases)
- [Commits](codespell-project/codespell@v2.4.2...v2.4.3)

Updates `hatchling` to 1.31.0
- [Release notes](https://github.com/pypa/hatch/releases)
- [Commits](pypa/hatch@hatchling-v1.30.1...hatchling-v1.31.0)

---
updated-dependencies:
- dependency-name: pandas
  dependency-version: 3.0.5
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: numpy
  dependency-version: 2.5.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: pyarrow
  dependency-version: 25.0.0
  dependency-type: direct:production
  update-type: version-update:semver-major
  dependency-group: python-dependencies
- dependency-name: matplotlib
  dependency-version: 3.11.1
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: hypothesis
  dependency-version: 6.163.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: ruff
  dependency-version: 0.16.0
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: pre-commit
  dependency-version: 4.6.1
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: commitizen
  dependency-version: 4.16.5
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: import-linter
  dependency-version: '2.13'
  dependency-type: direct:development
  update-type: version-update:semver-minor
  dependency-group: python-dependencies
- dependency-name: types-requests
  dependency-version: 2.33.0.20260712
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: pymarkdownlnt
  dependency-version: 0.9.39
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: codespell
  dependency-version: 2.4.3
  dependency-type: direct:development
  update-type: version-update:semver-patch
  dependency-group: python-dependencies
- dependency-name: hatchling
  dependency-version: 1.31.0
  dependency-type: direct:development
  dependency-group: python-dependencies
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python:uv Pull requests that update python:uv code labels Jul 29, 2026

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@sonarqubecloud

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dependabot Bot commented on behalf of github Aug 5, 2026

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Contributor Author

Looks like these dependencies are updatable in another way, so this is no longer needed.

@dependabot dependabot Bot closed this Aug 5, 2026
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dependabot Bot deleted the dependabot/uv/python-dependencies-6d7478d91d branch August 5, 2026 04:55
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